#mass-spectrometry

MetaboLights as an API, powered by EMBL-EBI — the world's premier open repository for metabolomics experiments (NMR spectroscopy and mass spectrometry) and a sister resource to PRIDE for proteomics. Search the public metabolomics studies by keyword (returning each study's accession, title, description and organism); read a study's full metadata including its abstract, status, submission and release dates, study-design descriptors, experimental factors, the analytical assays with their measurement type, technology and platform, the contributors and their roles, the linked publications with DOI and PubMed identifiers, submitters, sample count, FTP download URL and data license; inspect the analytical workflow — every protocol with its name, type, description and parameters (sample collection, extraction, chromatography, NMR/MS spectroscopy, data transformation and metabolite identification); and list the organisms and organism parts studied with their ontology terms. Ideal for metabolomics and systems-biology research, dataset reuse and meta-analysis, bioinformatics pipelines and tools that integrate experimental evidence. Study accessions look like MTBLS1. Data from EMBL-EBI MetaboLights.

api.oanor.com/metabolights-api

The PRIDE proteomics archive as an API, powered by the EMBL-EBI PRIDE Archive — the world's largest public repository of mass-spectrometry proteomics data and a founding member of ProteomeXchange. Search the public proteomics experiments by keyword (returning each project's accession, title, organisms, diseases and instruments); read a project's full metadata including its description, keywords, organisms and organism parts, mass-spectrometry instruments, software, the protein modifications identified, sample- and data-processing protocols, submitters, affiliations and the linked publication (DOI and PubMed); list a project's data files with their category, format, size and a direct download link; and explore facets — the diseases, organisms, instruments, experiment types, software and countries represented across matching projects — for discovery. Ideal for proteomics and systems-biology research, dataset reuse and meta-analysis, bioinformatics pipelines, and tools that integrate experimental evidence. Project accessions look like PXD000001. Data from EMBL-EBI.

api.oanor.com/pride-api